For those of you not familiar with ShinyStan, it is a graphical user interface for exploring Stan models (and more generally MCMC output from any software). For context, here’s the post on this blog first introducing ShinyStan (formerly shinyStan) from earlier this year. ShinyStan v2.0.0 released ShinyStan v2.0.0 is now available on CRAN. This is […] The post ShinyStan v2.0.0 appeared first on Statistical Modeling, Causal Inference, and Social Science.
This blog post is derived from a computer practical session that I ran as part of my new course on Statistics for Big Data, previously discussed. This course covered a lot of material very quickly. In particular, I deferred introducing notions of hierarchical modelling until the Bayesian part of the course, where I feel it … Continue reading One-way ANOVA with fixed and random effects from a Bayesian perspective
I am currently preparing a survey paper on the present state of computational statistics, reflecting on the massive evolution of the field since my early Monte Carlo simulations on an Apple //e, which would take a few days to return a curve of approximate expected squared error losses… It seems to me that MCMC is […]
Monday, I will be giving the closing talk of the R in Insurance Conference, in London, on Bayesian Computations for Actuaries, as to be more specific, Getting into Bayesian Wizardry… (with the eyes of a muggle actuary). The animated version of the slides (since we will spend some time on MCMC algorithm, I thought that animated graphs could be more informative) can be downloaded from here. Those slides are based…
At MCMSki IV, I attended (and chaired) a session where Martyn Plummer presented some developments on cut models. As I was not sure I had gotten the idea [although this happened to be one of those few sessions where the flu had not yet completely taken over!] and as I wanted to check about a […]
![MCMSki IV [day 3]](http://xianblog.files.wordpress.com/2014/01/ridge5.jpg?w=450&h=302)
Already on the final day..! And still this frustration in being unable to attend three sessions at once… Andrew Gelman started the day with a non-computational talk that broached on themes that are familiar to readers of his blog, on the misuse of significance tests and on recommendations for better practice. I then picked the […]
BUGS is the pioneering software that made MCMC available to so many of us, but it has some problems with robustness that are not suffered by the subsequent software JAGS. Readers of DBDA tell me of some new problems running models in BUGS, which I have...
Bayesian variable selection In a previous post I gave a quick introduction to using the rjags R package to access the JAGS Bayesian inference from within R. In this post I want to give a quick guide to using rjags for Bayesian variable selection. I intend to use this post as a starting point for […]
This post shows how to estimate trend coefficients when there is an auto-regressive AR(1) process on the deviation from the trend. The specific example uses a sinusoidal trend to describe daily temperatures across many years, but the programming method...
JAGS (Just Another Gibbs Sampler) is a general purpose MCMC engine similar to WinBUGS and OpenBUGS. I have a slight preference for JAGS as it is free and portable, works well on Linux, and interfaces well with R. It is tempting to write a tutorial introduction to JAGS and the corresponding R package, rjags, but […]
